EnhancerDB
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  3. rs140927173[chr5:171536461]
Enhancers that have rs140927173[chr5:171536461]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs140927173[chr5:171536461]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171536447 171536462 SCRT1 JASPAR yes 67763256
chr5 171536451 171536461 FIGLA JASPAR yes 67763258
chr5 171536451 171536461 ID4 JASPAR yes 67763259
chr5 171536451 171536461 TCF3 JASPAR yes 67763260
chr5 171536451 171536461 TCF4 JASPAR yes 67763261
chr5 171536453 171536462 ZEB1 JASPAR yes 67763262
Genes associated with rs140927173[chr5:171536461], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More