EnhancerDB
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  3. rs140939840[chr17:47176870]
Enhancers that have rs140939840[chr17:47176870]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47176198 47191535 enh17201
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs140939840[chr17:47176870]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47176868 47176878 TBX21 JASPAR yes 54615655
chr17 47176868 47176879 TBX20 JASPAR yes 54615656
chr17 47176868 47176879 TBX2 JASPAR yes 54615657
chr17 47176868 47176881 EOMES JASPAR yes 54615658
chr17 47176869 47176877 MGA JASPAR yes 54615659
chr17 47176869 47176877 TBX15 JASPAR yes 54615660
chr17 47176869 47176877 TBX1 JASPAR yes 54615661
chr17 47176869 47176877 TBX4 JASPAR yes 54615662
chr17 47176869 47176877 TBX5 JASPAR yes 54615663
chr17 47176869 47176879 TBR1 JASPAR yes 54615664
chr17 47176869 47176882 SMAD2 JASPAR yes 54615665
Genes associated with rs140939840[chr17:47176870], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More