EnhancerDB
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  3. rs141122176[chr12:52422546]
Enhancers that have rs141122176[chr12:52422546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52415565 52430755 enh2354
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Blood (T-cell) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs141122176[chr12:52422546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52422538 52422559 REST JASPAR yes 120913968
chr12 52422539 52422558 REST JASPAR yes 120913969
chr12 52422543 52422553 SP1 JASPAR yes 120913970
Genes associated with rs141122176[chr12:52422546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 51745031 51786651 - GALNT6 ENSG00000139629.11 51786651 635895 Breast 0.0115741 12068