EnhancerDB
  1. Home
  2. SNP
  3. rs141138040[chr17:53524007]
Enhancers that have rs141138040[chr17:53524007]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs141138040[chr17:53524007]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53523817 53524177 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772649
chr17 53523877 53524129 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772650
chr17 53523894 53524210 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772651
chr17 53523999 53524014 RUNX2 JASPAR yes 54851938
chr17 53524000 53524009 RUNX2 JASPAR yes 54851939
chr17 53524000 53524010 RUNX3 JASPAR yes 54851940
chr17 53524000 53524011 RUNX1 JASPAR yes 54851941
Genes associated with rs141138040[chr17:53524007], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More