EnhancerDB
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  3. rs141139564[chr1:172443526]
Enhancers that have rs141139564[chr1:172443526]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172440585 172461255 enh12372
Skin (Keratinocyte) Prostate (PC-3) Stomach Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs141139564[chr1:172443526]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172443403 172444776 ZNF143 GTRD no Epithelial (MCF-7) 21349898
chr1 172443423 172444476 ZNF143 GTRD no Epithelial (MCF-7) 21349899
chr1 172443474 172444761 ZNF143 GTRD no Epithelial (MCF-7) 21349900
chr1 172443483 172444519 ZNF143 GTRD no Epithelial (MCF-7) 21349901
chr1 172443486 172444757 ZNF143 GTRD no Epithelial (MCF-7) 21349902
chr1 172443504 172444471 ZNF143 GTRD no Epithelial (MCF-7) 21349903
chr1 172443507 172443527 RREB1 JASPAR yes 33130483
chr1 172443508 172443528 RREB1 JASPAR yes 33130485
chr1 172443511 172443532 IRF1 JASPAR yes 33130486
chr1 172443512 172443532 RREB1 JASPAR yes 33130487
chr1 172443514 172443529 FOXP1 JASPAR yes 33130488
chr1 172443516 172443531 FOXP1 JASPAR yes 33130489
chr1 172443516 172443537 IRF1 JASPAR yes 33130490
chr1 172443517 172443538 IRF1 JASPAR yes 33130491
chr1 172443518 172443530 FOXC2 JASPAR yes 33130492
chr1 172443519 172443530 FOXP2 JASPAR yes 33130493
chr1 172443522 172444719 ZNF143 GTRD no Epithelial (MCF-7) 21349904
Genes associated with rs141139564[chr1:172443526], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More