EnhancerDB
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  3. rs141363836[chr1:202012054]
Enhancers that have rs141363836[chr1:202012054]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs141363836[chr1:202012054]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 21365535
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 107857423
chr1 202008954 202021472 ZBTB33 GTRD no Lung (A549) 107857529
chr1 202009074 202012363 ZNF274 GTRD no Cervix (HeLa-S3) 21365642
chr1 202009111 202020493 ZBTB33 GTRD no Lung (A549) 107857530
chr1 202011735 202013508 TCF7L2 GTRD no Colon (HCT116) 21365761
chr1 202011863 202012424 TCF7L2 GTRD no Colon (HCT116) 21365762
chr1 202011874 202014365 TCF7L2 GTRD no Colon (HCT116) 21365763
chr1 202011900 202013986 TCF7L2 GTRD no Colon (HCT116) 21365764
chr1 202012046 202012057 CEBPB JASPAR yes 34545556
chr1 202012046 202012058 HLF JASPAR yes 34545557
chr1 202012047 202012058 CEBPA JASPAR yes 34545558
chr1 202012054 202012058 YY1 TRANSFAC yes 34545559
Genes associated with rs141363836[chr1:202012054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More