EnhancerDB
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  3. rs141510239[chr1:15742882]
Enhancers that have rs141510239[chr1:15742882]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15740198 15759915 enh26553
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 15742467 15743324 vista486
VISTA
Transcript factors that have rs141510239[chr1:15742882]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15741010 15743090 TCF7L2 GTRD no Colon (HCT116) 107802187
chr1 15742874 15742889 TFAP2C JASPAR yes 26983829
chr1 15742874 15742889 TFAP2C JASPAR yes 118236727
chr1 15742881 15742893 NHLH1 JASPAR yes 26983830
chr1 15742881 15742893 NHLH1 JASPAR yes 118236728
chr1 15742882 15742892 NHLH1 JASPAR yes 26983831
chr1 15742882 15742892 NHLH1 JASPAR yes 118236729
Genes associated with rs141510239[chr1:15742882], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More