EnhancerDB
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  3. rs141563139[chr1:9627226]
Enhancers that have rs141563139[chr1:9627226]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs141563139[chr1:9627226]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9627225 9627237 PKNOX1 JASPAR yes 26663155
chr1 9627225 9627237 PKNOX2 JASPAR yes 26663156
chr1 9627225 9627237 TGIF1 JASPAR yes 26663157
chr1 9627225 9627237 TGIF2 JASPAR yes 26663158
Genes associated with rs141563139[chr1:9627226], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More