EnhancerDB
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  3. rs141821279[chr19:13168638]
Enhancers that have rs141821279[chr19:13168638]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs141821279[chr19:13168638]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 21850576
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 107690442
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 108388444
chr19 13166741 13169326 ZNF274 GTRD no Blood (GM12878) 107690450
chr19 13166741 13169326 ZNF274 GTRD no Blood (GM12878) 108388452
chr19 13166817 13168668 TCF7L2 GTRD no Colon (HCT116) 21850581
chr19 13166817 13168668 TCF7L2 GTRD no Colon (HCT116) 107690458
chr19 13166817 13168668 TCF7L2 GTRD no Colon (HCT116) 108388460
chr19 13167236 13168945 ZNF274 GTRD no Blood (GM12878) 107690502
chr19 13167236 13168945 ZNF274 GTRD no Blood (GM12878) 108388504
chr19 13168619 13168640 ZNF263 JASPAR yes 112506103
chr19 13168623 13168644 ZNF263 JASPAR yes 112506105
chr19 13168624 13168645 ZNF263 JASPAR yes 112506106
chr19 13168627 13168648 ZNF263 JASPAR yes 112506109
chr19 13168631 13168642 E2F6 JASPAR yes 112506111
chr19 13168632 13168653 ZNF263 JASPAR yes 112506112
chr19 13168635 13168646 E2F6 JASPAR yes 112506113
Genes associated with rs141821279[chr19:13168638], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More