EnhancerDB
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  3. rs141919046[chr12:53369964]
Enhancers that have rs141919046[chr12:53369964]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs141919046[chr12:53369964]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53368995 53373584 TCF7L2 GTRD no Colon (HCT116) 21548544
chr12 53368995 53373584 TCF7L2 GTRD no Colon (HCT116) 108035373
chr12 53368995 53373584 TCF7L2 GTRD no Colon (HCT116) 108035374
chr12 53369439 53370694 TCF7L2 GTRD no Colon (HCT116) 21548552
chr12 53369439 53370694 TCF7L2 GTRD no Colon (HCT116) 108035381
chr12 53369710 53370280 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21548553
chr12 53369710 53370280 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108035382
chr12 53369905 53370561 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21548554
chr12 53369905 53370561 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035383
chr12 53369917 53370487 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21548555
chr12 53369917 53370487 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108035384
chr12 53369960 53369966 YY1 JASPAR yes 120969069
Genes associated with rs141919046[chr12:53369964], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More