EnhancerDB
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  3. rs142017662[chr16:28200273]
Enhancers that have rs142017662[chr16:28200273]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs142017662[chr16:28200273]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28200270 28200291 IRF1 JASPAR yes 10220721
chr16 28200272 28200287 PRDM1 JASPAR yes 10220722
chr16 28200272 28200287 STAT2 JASPAR yes 10220723
chr16 28200273 28200277 YY1 TRANSFAC yes 10220724
chr16 28200273 28200287 STAT1 JASPAR yes 10220725
Genes associated with rs142017662[chr16:28200273], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More