EnhancerDB
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  3. rs142019580[chr12:50609973]
Enhancers that have rs142019580[chr12:50609973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50600876 50615015 enh2345
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Stomach Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs142019580[chr12:50609973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50609965 50609980 RUNX2 JASPAR yes 120819586
chr12 50609966 50609975 RUNX2 JASPAR yes 120819587
chr12 50609966 50609976 RUNX3 JASPAR yes 120819588
Genes associated with rs142019580[chr12:50609973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More