EnhancerDB
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  3. rs142027840[chr1:39429527]
Enhancers that have rs142027840[chr1:39429527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39414298 39432055 enh11754
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs142027840[chr1:39429527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39429506 39429527 IRF1 JASPAR yes 28244867
chr1 39429523 39429538 PRDM1 JASPAR yes 28244870
chr1 39429523 39429538 STAT2 JASPAR yes 28244871
chr1 39429527 39429532 ETS2 TRANSFAC yes 28244872
Genes associated with rs142027840[chr1:39429527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More