EnhancerDB
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  3. rs142030847[chr5:78271713]
Enhancers that have rs142030847[chr5:78271713]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78266085 78279675 enh55336
Prostate (PC-3) Liver (HepG2) Kidney Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs142030847[chr5:78271713]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78271704 78271714 GSX2 JASPAR yes 63636555
chr5 78271705 78271713 BARX1 JASPAR yes 63636556
chr5 78271706 78271718 POU3F1 JASPAR yes 63636557
chr5 78271706 78271718 POU3F2 JASPAR yes 63636558
chr5 78271707 78271719 POU2F1 JASPAR yes 63636559
chr5 78271708 78271722 POU4F1 JASPAR yes 63636560
Genes associated with rs142030847[chr5:78271713], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More