EnhancerDB
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  3. rs142050951[chr1:27027527]
Enhancers that have rs142050951[chr1:27027527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27017585 27036395 enh166
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Blood (T-cell) Epithelial (MCF-7) Stomach Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142050951[chr1:27027527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27027518 27027530 NHLH1 JASPAR yes 27650032
chr1 27027519 27027529 ID4 JASPAR yes 27650033
chr1 27027519 27027529 NHLH1 JASPAR yes 27650034
chr1 27027519 27027529 TCF3 JASPAR yes 27650035
chr1 27027519 27027529 TCF4 JASPAR yes 27650036
chr1 27027520 27027529 SNAI2 JASPAR yes 27650037
Genes associated with rs142050951[chr1:27027527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More