-
Home
- SNP
- rs142052784[chr12:113478520]
Enhancers that have rs142052784[chr12:113478520]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
113475003 |
113480953 |
enh58481 |
|
|
Transcript factors that have rs142052784[chr12:113478520]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
113477185
|
113484250
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108060058
|
|
|
chr12
|
113478281
|
113479181
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21574107
|
|
|
chr12
|
113478281
|
113479181
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108060059
|
|
|
chr12
|
113478354
|
113478884
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21574108
|
|
|
chr12
|
113478354
|
113478884
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108060060
|
|
|
chr12
|
113478356
|
113478736
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
108060061
|
|
|
chr12
|
113478366
|
113478882
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21574109
|
|
|
chr12
|
113478366
|
113478882
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108060062
|
|
|
chr12
|
113478372
|
113478907
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21574110
|
|
|
chr12
|
113478372
|
113478907
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108060063
|
|
|
chr12
|
113478380
|
113478708
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
108060064
|
|
|
chr12
|
113478414
|
113479155
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21574111
|
|
|
chr12
|
113478414
|
113479155
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108060065
|
|
|
chr12
|
113478423
|
113478933
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21574112
|
|
|
chr12
|
113478423
|
113478933
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108060066
|
|
|
chr12
|
113478425
|
113478745
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21574113
|
|
|
chr12
|
113478425
|
113478745
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108060067
|
|
|
chr12
|
113478444
|
113478950
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
108060068
|
|
|
chr12
|
113478468
|
113478724
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21574114
|
|
|
chr12
|
113478468
|
113478724
|
FOS
|
UCSC Txn Factor
|
no
|
Conserved
|
108060069
|
|
|
chr12
|
113478468
|
113478724
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108060070
|
|
|
chr12
|
113478488
|
113478943
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108060071
|
|
|
chr12
|
113478514
|
113478525
|
TBX2
|
JASPAR
|
yes
|
|
82479008
|
|
|
chr12
|
113478514
|
113478525
|
TBX2
|
JASPAR
|
yes
|
|
123808444
|
|
Genes associated with rs142052784[chr12:113478520], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |