EnhancerDB
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  3. rs142108230[chr1:12003036]
Enhancers that have rs142108230[chr1:12003036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 11996824 12003175 enh26533
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
Transcript factors that have rs142108230[chr1:12003036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12003018 12003038 RREB1 JASPAR yes 26792638
chr1 12003019 12003039 RREB1 JASPAR yes 26792639
chr1 12003023 12003043 RREB1 JASPAR yes 26792642
chr1 12003025 12003040 RUNX2 JASPAR yes 26792643
chr1 12003026 12003038 FOXI1 JASPAR yes 26792644
chr1 12003026 12003046 RREB1 JASPAR yes 26792645
chr1 12003029 12003041 IRF1 JASPAR yes 26792646
chr1 12003031 12003051 RREB1 JASPAR yes 26792647
chr1 12003031 12003052 IRF1 JASPAR yes 26792648
chr1 12003032 12003053 IRF1 JASPAR yes 26792649
chr1 12003033 12003053 RREB1 JASPAR yes 26792650
Genes associated with rs142108230[chr1:12003036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More