EnhancerDB
  1. Home
  2. SNP
  3. rs142138229[chr1:12534552]
Enhancers that have rs142138229[chr1:12534552]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12527565 12557135 enh11513
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Blood (T-cell) Liver Astrocyte Lung (PC-9) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs142138229[chr1:12534552]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12534543 12534558 FOXP1 JASPAR yes 26823536
chr1 12534543 12534564 IRF1 JASPAR yes 26823537
chr1 12534544 12534559 FOXP1 JASPAR yes 26823538
chr1 12534547 12534562 PRDM1 JASPAR yes 26823540
chr1 12534547 12534562 STAT2 JASPAR yes 26823541
chr1 12534547 12534565 NR3C1 JASPAR yes 26823542
chr1 12534552 12534568 SOX4 JASPAR yes 26823543
Genes associated with rs142138229[chr1:12534552], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More