EnhancerDB
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  3. rs142138978[chr1:228078401]
Enhancers that have rs142138978[chr1:228078401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228069592 228093895 enh12737
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs142138978[chr1:228078401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228078389 228078404 TFAP2C JASPAR yes 35891165
chr1 228078397 228078412 TFAP2A JASPAR yes 35891166
chr1 228078397 228078412 TFAP2C JASPAR yes 35891167
chr1 228078399 228078412 TFAP2A JASPAR yes 35891168
chr1 228078399 228078412 TFAP2B JASPAR yes 35891169
chr1 228078399 228078412 TFAP2C JASPAR yes 35891170
chr1 228078399 228080125 ZNF274 GTRD no Bone Marrow (K562) 21388308
chr1 228078399 228080125 ZNF274 GTRD no Bone Marrow (K562) 107876803
chr1 228078400 228078411 EBF1 JASPAR yes 35891171
Genes associated with rs142138978[chr1:228078401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More