EnhancerDB
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  3. rs142140092[chr17:79397555]
Enhancers that have rs142140092[chr17:79397555]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142140092[chr17:79397555]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79397030 79397566 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108309600
chr17 79397542 79397561 RFX2 JASPAR yes 56326698
chr17 79397546 79397562 RFX2 JASPAR yes 56326699
chr17 79397546 79397562 RFX3 JASPAR yes 56326700
chr17 79397546 79397562 RFX4 JASPAR yes 56326701
chr17 79397546 79397562 RFX5 JASPAR yes 56326702
chr17 79397547 79397566 RFX2 JASPAR yes 56326703
Genes associated with rs142140092[chr17:79397555], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More