EnhancerDB
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  3. rs142153412[chr19:1208642]
Enhancers that have rs142153412[chr19:1208642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1201505 1220340 enh17841
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs142153412[chr19:1208642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1205025 1208739 ZNF274 GTRD no Bone Marrow (K562) 21831764
chr19 1205025 1208739 ZNF274 GTRD no Bone Marrow (K562) 108351162
chr19 1205130 1208766 TCF7L2 GTRD no Colon (HCT116) 21831766
chr19 1205130 1208766 TCF7L2 GTRD no Colon (HCT116) 108351165
chr19 1205712 1209405 ZNF274 GTRD no Bone Marrow (K562) 21831769
chr19 1205712 1209405 ZNF274 GTRD no Bone Marrow (K562) 108351168
chr19 1206341 1208785 ZNF274 GTRD no Bone Marrow (K562) 21831775
chr19 1206341 1208785 ZNF274 GTRD no Bone Marrow (K562) 108351177
chr19 1206891 1208799 ZNF274 GTRD no Bone Marrow (K562) 21831788
chr19 1206891 1208799 ZNF274 GTRD no Bone Marrow (K562) 108351207
chr19 1206945 1208795 ZNF274 GTRD no Bone Marrow (K562) 21831791
chr19 1206945 1208795 ZNF274 GTRD no Bone Marrow (K562) 108351210
chr19 1207027 1208777 ZNF274 GTRD no Bone Marrow (K562) 21831797
chr19 1207027 1208777 ZNF274 GTRD no Bone Marrow (K562) 108351217
chr19 1207042 1208771 ZNF274 GTRD no Bone Marrow (K562) 21831801
chr19 1207042 1208771 ZNF274 GTRD no Bone Marrow (K562) 108351222
chr19 1207336 1208717 ZNF143 GTRD no Epithelial (MCF-7) 108351254
chr19 1207612 1208699 ZNF143 GTRD no Epithelial (MCF-7) 108351297
chr19 1208636 1208657 IRF1 JASPAR yes 112002467
chr19 1208640 1208655 IRF9 JASPAR yes 112002468
Genes associated with rs142153412[chr19:1208642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More