EnhancerDB
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  3. rs142199925[chr1:221899165]
Enhancers that have rs142199925[chr1:221899165]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221879328 221909475 enh12696
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Heart
chr1 221899063 221899285 vista5209
VISTA
Transcript factors that have rs142199925[chr1:221899165]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 221899006 221899462 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21382607
chr1 221899006 221899462 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107871869
chr1 221899041 221899417 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21382608
chr1 221899041 221899417 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107871870
chr1 221899078 221899358 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21382609
chr1 221899078 221899358 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107871871
chr1 221899082 221899402 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21382610
chr1 221899082 221899402 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107871872
chr1 221899089 221899353 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21382611
chr1 221899089 221899353 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107871873
chr1 221899160 221899173 SCRT2 JASPAR yes 35562450
chr1 221899160 221899173 SCRT2 JASPAR yes 118463952
Genes associated with rs142199925[chr1:221899165], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More