EnhancerDB
  1. Home
  2. SNP
  3. rs142203919[chr1:3226516]
Enhancers that have rs142203919[chr1:3226516]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142203919[chr1:3226516]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3226506 3226523 RARA JASPAR yes 26277935
chr1 3226506 3226523 RXRA JASPAR yes 26277936
chr1 3226516 3226521 SP1 TRANSFAC yes 26277937
chr1 3226516 3226534 ESR1 JASPAR yes 26277938
Genes associated with rs142203919[chr1:3226516], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More