EnhancerDB
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  3. rs142205254[chr1:209822685]
Enhancers that have rs142205254[chr1:209822685]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209812905 209822992 enh12620
Bone Marrow (K562) Prostate (RWPE1) Ovary Esophagus Liver Lung Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Uterus Heart
chr1 209822403 209823008 vista4913
VISTA
Transcript factors that have rs142205254[chr1:209822685]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209822280 209822716 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21375522
chr1 209822280 209822716 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107865958
chr1 209822394 209824307 ZNF274 GTRD no Bone Marrow (K562) 21375524
chr1 209822394 209824307 ZNF274 GTRD no Bone Marrow (K562) 107865960
chr1 209822431 209824191 ZBTB33 GTRD no Lung (A549) 107865961
chr1 209822464 209823040 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107865962
chr1 209822471 209824058 ZNF274 GTRD no Cervix (HeLa-S3) 107865963
chr1 209822498 209823819 ZNF143 GTRD no Epithelial (MCF-7) 107865964
chr1 209822515 209824221 ZNF274 GTRD no Bone Marrow (K562) 21375525
chr1 209822515 209824221 ZNF274 GTRD no Bone Marrow (K562) 107865965
chr1 209822558 209823908 ZNF274 GTRD no Blood (GM12878) 107865966
chr1 209822569 209822909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107865967
chr1 209822583 209823027 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107865968
chr1 209822588 209823961 ZNF274 GTRD no Blood (GM12878) 107865969
chr1 209822590 209823046 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21375526
chr1 209822590 209823046 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107865970
chr1 209822602 209822998 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21375527
chr1 209822602 209822998 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107865971
chr1 209822607 209823083 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107865972
chr1 209822616 209823939 ZNF143 GTRD no Epithelial (MCF-7) 107865973
chr1 209822619 209822979 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21375528
chr1 209822619 209822979 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107865974
chr1 209822627 209823003 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107865975
chr1 209822629 209823029 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21375529
chr1 209822629 209823029 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107865976
chr1 209822630 209822960 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107865977
chr1 209822632 209823136 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107865978
chr1 209822637 209822957 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107865979
chr1 209822650 209824022 ZNF274 GTRD no Cervix (HeLa-S3) 107865980
chr1 209822651 209823015 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21375530
chr1 209822651 209823015 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107865981
chr1 209822655 209823011 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107865982
chr1 209822655 209824200 ZBTB33 GTRD no Lung (A549) 107865983
chr1 209822675 209822689 ZIC1 JASPAR yes 34987795
chr1 209822675 209822689 ZIC1 JASPAR yes 118448982
chr1 209822675 209822690 SCRT1 JASPAR yes 34987796
chr1 209822675 209822690 ZIC3 JASPAR yes 34987797
chr1 209822675 209822690 ZIC4 JASPAR yes 34987798
chr1 209822675 209822690 SCRT1 JASPAR yes 118448983
chr1 209822675 209822690 ZIC3 JASPAR yes 118448984
chr1 209822675 209822690 ZIC4 JASPAR yes 118448985
chr1 209822684 209822928 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21375531
chr1 209822684 209822928 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107865984
chr1 209822684 209823931 ZNF274 GTRD no Bone Marrow (K562) 21375532
chr1 209822684 209823931 ZNF274 GTRD no Bone Marrow (K562) 107865985
chr1 209822685 209822694 THAP1 JASPAR yes 34987799
chr1 209822685 209822694 THAP1 JASPAR yes 118448986
Genes associated with rs142205254[chr1:209822685], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More