EnhancerDB
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  3. rs1422336[chr19:14478166]
Enhancers that have rs1422336[chr19:14478166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14470665 14486095 enh5020
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs1422336[chr19:14478166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14474907 14478714 ZNF274 GTRD no Bone Marrow (K562) 21853333
chr19 14477561 14478314 ZNF274 GTRD no Bone Marrow (K562) 21853427
chr19 14477712 14478509 ZNF143 GTRD no Epithelial (MCF-7) 21853429
chr19 14477714 14478359 ZNF143 GTRD no Epithelial (MCF-7) 21853430
chr19 14477770 14478912 ZNF143 GTRD no Epithelial (MCF-7) 21853431
chr19 14477796 14478729 ZNF143 GTRD no Epithelial (MCF-7) 21853432
chr19 14477897 14478794 TCF7L2 GTRD no Colon (HCT116) 21853433
chr19 14477976 14478197 ZNF143 GTRD no Epithelial (MCF-7) 21853434
chr19 14478025 14478746 TCF7L2 GTRD no Colon (HCT116) 21853435
chr19 14478108 14478666 TCF7L2 GTRD no Colon (HCT116) 21853436
chr19 14478162 14478180 RARA JASPAR yes 112566541
Genes associated with rs1422336[chr19:14478166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 13906274 13943044 + ZSWIM4 ENSG00000132003.5 13906274 535122 Pancreas 0.228765 17122