EnhancerDB
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  3. rs142246940[chr2:37782854]
Enhancers that have rs142246940[chr2:37782854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 37774853 37803415 enh5416
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus
chr2 37782769 37783216 vista31005
VISTA
Transcript factors that have rs142246940[chr2:37782854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 37782590 37782866 MAX UCSC Txn Factor no Conserved 108431792
chr2 37782680 37782996 EBF1 UCSC Txn Factor no Conserved 108431793
chr2 37782839 37782854 RUNX2 JASPAR yes 22032691
chr2 37782839 37782854 RUNX2 JASPAR yes 73060212
Genes associated with rs142246940[chr2:37782854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More