EnhancerDB
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  3. rs142255328[chr1:201569004]
Enhancers that have rs142255328[chr1:201569004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs142255328[chr1:201569004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201568222 201569506 ZNF143 GTRD no Epithelial (MCF-7) 21365164
chr1 201568705 201569533 ZNF143 GTRD no Epithelial (MCF-7) 21365165
chr1 201568706 201569497 ZNF143 GTRD no Epithelial (MCF-7) 21365166
chr1 201568731 201569027 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21365167
chr1 201568991 201569007 SRF JASPAR yes 34511694
chr1 201568991 201569009 SRF JASPAR yes 34511695
chr1 201569001 201569009 FOXO3 JASPAR yes 34511697
chr1 201569002 201569011 SRY JASPAR yes 34511698
Genes associated with rs142255328[chr1:201569004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 200860176 200884863 + C1orf106 ENSG00000163362.6 200860176 684141 Lung 0.293771 1697