EnhancerDB
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  3. rs142258409[chr16:29307563]
Enhancers that have rs142258409[chr16:29307563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29294585 29314235 enh16624
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs142258409[chr16:29307563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29307200 29308644 ZNF274 GTRD no Liver (HepG2) 21702228
chr16 29307251 29308979 ZNF274 GTRD no Liver (HepG2) 21702229
chr16 29307392 29309355 ZNF274 GTRD no Liver (HepG2) 21702230
chr16 29307412 29308454 ZNF143 GTRD no Epithelial (MCF-7) 21702231
chr16 29307461 29307766 ZNF274 GTRD no Bone Marrow (K562) 21702232
chr16 29307479 29308403 ZNF274 GTRD no Liver (HepG2) 21702233
chr16 29307488 29308588 ZNF143 GTRD no Epithelial (MCF-7) 21702234
chr16 29307500 29308508 ZNF143 GTRD no Epithelial (MCF-7) 21702235
chr16 29307505 29308856 ZNF274 GTRD no Liver (HepG2) 21702236
chr16 29307521 29308617 ZNF143 GTRD no Epithelial (MCF-7) 21702237
chr16 29307535 29308694 ZNF274 GTRD no Liver (HepG2) 21702238
chr16 29307536 29308506 ZNF143 GTRD no Epithelial (MCF-7) 21702239
chr16 29307555 29307576 ZNF263 JASPAR yes 10258790
chr16 29307559 29307570 ESRRA JASPAR yes 10258791
chr16 29307559 29307570 ESRRB JASPAR yes 10258792
chr16 29307560 29307568 NR4A2 JASPAR yes 10258793
chr16 29307561 29307575 RXRB JASPAR yes 10258794
chr16 29307561 29307575 RXRG JASPAR yes 10258795
Genes associated with rs142258409[chr16:29307563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More