EnhancerDB
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  3. rs142263231[chr1:228973053]
Enhancers that have rs142263231[chr1:228973053]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs142263231[chr1:228973053]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228973020 228974092 POLR2A UCSC Txn Factor no Conserved 107877499
chr1 228973042 228973053 USF2 JASPAR yes 35934126
chr1 228973052 228973062 SP1 JASPAR yes 35934127
Genes associated with rs142263231[chr1:228973053], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More