EnhancerDB
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  3. rs142284775[chr16:88297044]
Enhancers that have rs142284775[chr16:88297044]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs142284775[chr16:88297044]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88296753 88297839 TCF7L2 GTRD no Colon (HCT116) 21735675
chr16 88296880 88297765 TCF7L2 GTRD no Colon (HCT116) 21735676
chr16 88296962 88299423 P63 GTRD no Skin (Keratinocyte) 108221871
chr16 88296991 88299886 P63 GTRD no Skin (Keratinocyte) 108221872
chr16 88297035 88297050 ZBTB33 JASPAR yes 12271603
chr16 88297040 88297051 E2F1 JASPAR yes 12271604
chr16 88297041 88297052 E2F4 JASPAR yes 12271605
chr16 88297041 88297052 E2F6 JASPAR yes 12271606
chr16 88297042 88297057 NR2C2 JASPAR yes 12271607
Genes associated with rs142284775[chr16:88297044], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More