EnhancerDB
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  3. rs142288292[chr1:15518197]
Enhancers that have rs142288292[chr1:15518197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs142288292[chr1:15518197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15518179 15518199 PPARG JASPAR yes 26969140
chr1 15518194 15518206 POU2F1 JASPAR yes 26969142
chr1 15518194 15518207 POU3F3 JASPAR yes 26969143
chr1 15518194 15518208 POU1F1 JASPAR yes 26969144
chr1 15518195 15518206 FOXA1 JASPAR yes 26969145
chr1 15518195 15518207 POU3F1 JASPAR yes 26969146
chr1 15518195 15518207 POU3F2 JASPAR yes 26969147
chr1 15518195 15518208 POU2F2 JASPAR yes 26969148
chr1 15518195 15518210 FOXA1 JASPAR yes 26969149
chr1 15518196 15518205 POU3F4 JASPAR yes 26969150
chr1 15518196 15518205 POU5F1B JASPAR yes 26969151
chr1 15518196 15518207 FOXB1 JASPAR yes 26969152
chr1 15518196 15518207 FOXC1 JASPAR yes 26969153
chr1 15518196 15518208 FOXC2 JASPAR yes 26969154
chr1 15518197 15518204 POU2F1 TRANSFAC yes 26969155
chr1 15518197 15518204 POU2F2 TRANSFAC yes 26969156
Genes associated with rs142288292[chr1:15518197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More