EnhancerDB
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  3. rs142307500[chr1:209531260]
Enhancers that have rs142307500[chr1:209531260]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209520845 209532735 enh50165
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Large Intestine Esophagus Bone (Osteoblast) Uterus Muscle (Myoblast) Neural Stem Cells (H9)
Transcript factors that have rs142307500[chr1:209531260]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209530509 209534382 AR GTRD no Prostate (PC-3) 21375159
chr1 209530998 209531588 ZBTB33 GTRD no Brain (SK-N-SH) 21375160
chr1 209531023 209531626 ZBTB33 GTRD no Brain (SK-N-SH) 21375161
chr1 209531038 209531564 ZBTB33 GTRD no Brain (SK-N-SH) 21375162
chr1 209531049 209531542 ZBTB33 GTRD no Brain (SK-N-SH) 21375163
chr1 209531249 209531262 JUN JASPAR yes 34966759
chr1 209531253 209531264 HOXC13 JASPAR yes 34966760
chr1 209531253 209531264 HOXD12 JASPAR yes 34966761
chr1 209531254 209531263 CDX1 JASPAR yes 34966762
chr1 209531254 209531264 HOXA13 JASPAR yes 34966763
chr1 209531254 209531264 HOXB13 JASPAR yes 34966764
chr1 209531254 209531264 HOXC10 JASPAR yes 34966765
chr1 209531254 209531264 HOXD11 JASPAR yes 34966766
chr1 209531254 209531264 HOXD13 JASPAR yes 34966767
Genes associated with rs142307500[chr1:209531260], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More