EnhancerDB
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  3. rs142346139[chr17:76929346]
Enhancers that have rs142346139[chr17:76929346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142346139[chr17:76929346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76929161 76929691 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795355
chr17 76929161 76929691 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108304350
chr17 76929179 76929695 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795356
chr17 76929179 76929695 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108304351
chr17 76929331 76929346 HNF4A JASPAR yes 56190016
chr17 76929332 76929346 NR2F1 JASPAR yes 56190017
chr17 76929332 76929347 HNF4G JASPAR yes 56190018
chr17 76929345 76929366 ZNF263 JASPAR yes 56190019
Genes associated with rs142346139[chr17:76929346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More