EnhancerDB
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  3. rs142353252[chr1:22582646]
Enhancers that have rs142353252[chr1:22582646]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22573285 22604835 enh11598
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Ovary Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs142353252[chr1:22582646]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22582639 22582649 GABPA JASPAR yes 27355448
chr1 22582639 22582652 ELF1 JASPAR yes 27355449
chr1 22582641 22582647 ETS1 JASPAR yes 27355450
chr1 22582641 22582647 SPI1 JASPAR yes 27355451
chr1 22582641 22582651 ELK1 JASPAR yes 27355452
chr1 22582646 22582658 GLI2 JASPAR yes 27355453
Genes associated with rs142353252[chr1:22582646], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More