EnhancerDB
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  3. rs142378679[chr17:53653980]
Enhancers that have rs142378679[chr17:53653980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53639444 53669835 enh17231
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs142378679[chr17:53653980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53653513 53654063 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772770
chr17 53653722 53654118 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21772771
chr17 53653819 53654443 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21772772
chr17 53653819 53654443 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273086
chr17 53653829 53654205 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21772773
chr17 53653829 53654205 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273087
chr17 53653846 53654090 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21772774
chr17 53653847 53654101 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21772775
chr17 53653860 53654380 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21772776
chr17 53653860 53654380 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273088
chr17 53653863 53654119 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21772777
chr17 53653942 53654018 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21772778
chr17 53653966 53653981 JUND JASPAR yes 54861020
chr17 53653967 53653980 DUXA JASPAR yes 54861021
chr17 53653969 53653986 ESR1 JASPAR yes 54861022
chr17 53653969 53653987 ESR2 JASPAR yes 54861023
chr17 53653970 53653983 JUN JASPAR yes 54861024
Genes associated with rs142378679[chr17:53653980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More