EnhancerDB
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  3. rs142397579[chr1:212401579]
Enhancers that have rs142397579[chr1:212401579]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212396705 212423635 enh12640
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs142397579[chr1:212401579]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212401568 212401580 GLI2 JASPAR yes 35112197
chr1 212401568 212401583 RUNX2 JASPAR yes 35112198
chr1 212401569 212401579 RUNX3 JASPAR yes 35112199
chr1 212401576 212401587 FOS JASPAR yes 35112200
chr1 212401576 212401587 FOSL1 JASPAR yes 35112201
chr1 212401576 212401587 NFE2 JASPAR yes 35112202
chr1 212401577 212401585 JUND TRANSFAC yes 35112203
chr1 212401577 212401586 JDP2 JASPAR yes 35112204
chr1 212401577 212401588 FOSL2 JASPAR yes 35112205
chr1 212401578 212401584 JUN TRANSFAC yes 35112206
Genes associated with rs142397579[chr1:212401579], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More