EnhancerDB
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  3. rs142401256[chr1:16233100]
Enhancers that have rs142401256[chr1:16233100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16216545 16234615 enh82
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Thyroid Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Stomach
Transcript factors that have rs142401256[chr1:16233100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16233087 16233104 RXRA JASPAR yes 27014181
chr1 16233092 16233106 XBP1 JASPAR yes 27014182
chr1 16233094 16233111 NR3C1 JASPAR yes 27014183
chr1 16233094 16233111 NR3C2 JASPAR yes 27014184
chr1 16233098 16233103 ATF1 TRANSFAC yes 27014185
chr1 16233099 16233111 HES7 JASPAR yes 27014186
chr1 16233100 16233110 TFEB JASPAR yes 27014187
chr1 16233100 16233110 TFEC JASPAR yes 27014188
chr1 16233100 16233111 USF2 JASPAR yes 27014189
Genes associated with rs142401256[chr1:16233100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More