EnhancerDB
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  3. rs142410194[chr16:1338647]
Enhancers that have rs142410194[chr16:1338647]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs142410194[chr16:1338647]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1336565 1338880 ZNF143 GTRD no Epithelial (MCF-7) 21684534
chr16 1337318 1340439 ZNF143 GTRD no Epithelial (MCF-7) 21684538
chr16 1337318 1340439 ZNF143 GTRD no Epithelial (MCF-7) 108171312
chr16 1337326 1339050 TCF7L2 GTRD no Colon (HCT116) 21684539
chr16 1337361 1339591 TCF7L2 GTRD no Colon (HCT116) 21684541
chr16 1337361 1339591 TCF7L2 GTRD no Colon (HCT116) 108171313
chr16 1337400 1339113 ZNF143 GTRD no Epithelial (MCF-7) 21684542
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 21684544
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171314
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171315
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171316
chr16 1337589 1339388 ZNF143 GTRD no Epithelial (MCF-7) 21684546
chr16 1337589 1339388 ZNF143 GTRD no Epithelial (MCF-7) 108171317
chr16 1337592 1339162 ZNF143 GTRD no Epithelial (MCF-7) 21684547
chr16 1337630 1339134 TCF7L2 GTRD no Colon (HCT116) 21684548
chr16 1337633 1339066 ZNF143 GTRD no Epithelial (MCF-7) 21684549
chr16 1337681 1338751 ZNF274 GTRD no Cervix (HeLa-S3) 21684551
chr16 1337797 1338682 ZNF143 GTRD no Epithelial (MCF-7) 21684552
chr16 1337802 1338829 ZNF143 GTRD no Epithelial (MCF-7) 21684553
chr16 1337804 1339504 TCF7L2 GTRD no Colon (HCT116) 21684554
chr16 1337804 1339504 TCF7L2 GTRD no Colon (HCT116) 108171318
chr16 1337819 1338708 TCF7L2 GTRD no Colon (HCT116) 21684555
chr16 1337869 1338768 ZNF274 GTRD no Cervix (HeLa-S3) 21684559
chr16 1337881 1338974 ZNF143 GTRD no Epithelial (MCF-7) 21684560
chr16 1337900 1338694 ZNF274 GTRD no Liver (HepG2) 21684561
chr16 1338032 1338749 TCF7L2 GTRD no Colon (HCT116) 21684563
chr16 1338043 1338647 ZNF274 GTRD no Liver (HepG2) 21684565
chr16 1338056 1338758 TCF7L2 GTRD no Colon (HCT116) 21684566
chr16 1338088 1338803 ZNF143 GTRD no Epithelial (MCF-7) 21684568
chr16 1338135 1339387 TCF7L2 GTRD no Colon (HCT116) 21684571
chr16 1338135 1339387 TCF7L2 GTRD no Colon (HCT116) 108171319
chr16 1338627 1338647 RREB1 JASPAR yes 9148304
chr16 1338638 1338652 ZIC1 JASPAR yes 9148307
chr16 1338638 1338653 ZIC3 JASPAR yes 9148308
chr16 1338638 1338653 ZIC4 JASPAR yes 9148309
Genes associated with rs142410194[chr16:1338647], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More