EnhancerDB
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  3. rs142412790[chr1:15745478]
Enhancers that have rs142412790[chr1:15745478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15740198 15759915 enh26553
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142412790[chr1:15745478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15745469 15745483 TLX1 JASPAR yes 26984232
chr1 15745470 15745484 TLX1 JASPAR yes 26984233
chr1 15745477 15745490 SMAD2 JASPAR yes 26984234
Genes associated with rs142412790[chr1:15745478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More