EnhancerDB
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  3. rs142416580[chr1:153573504]
Enhancers that have rs142416580[chr1:153573504]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153567604 153573987 enh628
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs142416580[chr1:153573504]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153571463 153573818 ZNF274 GTRD no Cervix (HeLa-S3) 21339807
chr1 153572215 153573652 ZNF274 GTRD no Cervix (HeLa-S3) 21339809
chr1 153572389 153573827 ZNF274 GTRD no Cervix (HeLa-S3) 21339815
chr1 153573493 153573507 PLAG1 JASPAR yes 32262391
chr1 153573500 153573505 SP1 TRANSFAC yes 32262392
chr1 153573501 153573506 SP1 TRANSFAC yes 32262393
Genes associated with rs142416580[chr1:153573504], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More