EnhancerDB
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  3. rs142420178[chr1:27435742]
Enhancers that have rs142420178[chr1:27435742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27433689 27453155 enh170
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142420178[chr1:27435742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27435735 27435745 RORA JASPAR yes 27677075
chr1 27435740 27435744 ESR1 TRANSFAC yes 27677076
Genes associated with rs142420178[chr1:27435742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 26437664 26452034 + PDIK1L ENSG00000175087.5 26437664 983708 Pancreas 0.335631 358