EnhancerDB
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  3. rs142424516[chr1:228073263]
Enhancers that have rs142424516[chr1:228073263]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228069592 228093895 enh12737
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs142424516[chr1:228073263]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228071432 228073682 ZNF274 GTRD no Blood (GM12878) 107876764
chr1 228071585 228073575 ZBTB33 GTRD no Lung (A549) 107876765
chr1 228072053 228073601 ZBTB33 GTRD no Lung (A549) 107876767
chr1 228072316 228073559 ZNF274 GTRD no Blood (GM12878) 107876768
chr1 228072370 228074595 TCF7L2 GTRD no Colon (HCT116) 107876769
chr1 228072459 228073484 ZNF274 GTRD no Bone Marrow (K562) 21388234
chr1 228072459 228073484 ZNF274 GTRD no Bone Marrow (K562) 107876770
chr1 228072579 228074663 TCF7L2 GTRD no Colon (HCT116) 107876772
chr1 228072843 228074594 TCF7L2 GTRD no Colon (HCT116) 107876773
chr1 228072913 228074553 TCF7L2 GTRD no Colon (HCT116) 107876774
chr1 228072920 228074595 ZNF143 GTRD no Epithelial (MCF-7) 21388236
chr1 228072920 228074595 ZNF143 GTRD no Epithelial (MCF-7) 107876775
chr1 228072984 228073272 ZNF274 GTRD no Blood (GM12878) 107876776
chr1 228073205 228074628 ZNF143 GTRD no Epithelial (MCF-7) 21388237
chr1 228073205 228074628 ZNF143 GTRD no Epithelial (MCF-7) 107876777
chr1 228073229 228074677 ZNF274 GTRD no Bone Marrow (K562) 21388238
chr1 228073229 228074677 ZNF274 GTRD no Bone Marrow (K562) 107876778
chr1 228073255 228073269 MTF1 JASPAR yes 35890368
chr1 228073255 228073269 MTF1 JASPAR yes 118473465
chr1 228073260 228073275 AR JASPAR yes 35890369
chr1 228073260 228073275 AR JASPAR yes 118473466
chr1 228073263 228073267 NFE TRANSFAC yes 35890370
chr1 228073263 228073599 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388239
Genes associated with rs142424516[chr1:228073263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More