EnhancerDB
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  3. rs142428004[chr18:55905901]
Enhancers that have rs142428004[chr18:55905901]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55895930 55912515 enh17738
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Heart
Transcript factors that have rs142428004[chr18:55905901]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55905897 55905912 HNF1A JASPAR yes 110931263
chr18 55905898 55905911 HNF1B JASPAR yes 110931264
chr18 55905898 55905913 HNF1A JASPAR yes 110931265
chr18 55905899 55905912 HNF1B JASPAR yes 110931266
Genes associated with rs142428004[chr18:55905901], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More