EnhancerDB
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  3. rs142497490[chr2:236415525]
Enhancers that have rs142497490[chr2:236415525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142497490[chr2:236415525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236415520 236415529 THAP1 JASPAR yes 81975555
chr2 236415521 236415536 TFAP2A JASPAR yes 81975556
Genes associated with rs142497490[chr2:236415525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More