EnhancerDB
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  3. rs142498825[chr10:24754290]
Enhancers that have rs142498825[chr10:24754290]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 24740285 24755345 enh13061
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Blood (T-cell) Epithelial (MCF-7)
chr10 24754185 24754590 vista6816
VISTA
Transcript factors that have rs142498825[chr10:24754290]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 24753961 24754405 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107904278
chr10 24754154 24754423 ZNF143 GTRD no Epithelial (MCF-7) 21422235
chr10 24754154 24754423 ZNF143 GTRD no Epithelial (MCF-7) 107904279
chr10 24754290 24754299 THAP1 JASPAR yes 21061024
chr10 24754290 24754299 THAP1 JASPAR yes 126077219
Genes associated with rs142498825[chr10:24754290], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More