EnhancerDB
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  3. rs142527705[chr6:12052067]
Enhancers that have rs142527705[chr6:12052067]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12042640 12055275 enh8953
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs142527705[chr6:12052067]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12051998 12052442 NFIC UCSC Txn Factor no Conserved 108538515
chr6 12052021 12052429 RELA UCSC Txn Factor no Conserved 108538516
chr6 12052025 12052410 EP300 UCSC Txn Factor no Conserved 108538517
chr6 12052059 12052069 NFATC3 JASPAR yes 99940870
chr6 12052063 12052078 FOXA1 JASPAR yes 99940871
chr6 12052063 12052414 RUNX3 UCSC Txn Factor no Conserved 108538518
chr6 12052066 12052077 FOXB1 JASPAR yes 99940872
chr6 12052066 12052077 FOXC1 JASPAR yes 99940873
chr6 12052067 12052071 YY1 TRANSFAC yes 99940874
chr6 12052067 12052078 FOXA1 JASPAR yes 99940875
Genes associated with rs142527705[chr6:12052067], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More