EnhancerDB
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  3. rs142532517[chr6:13352032]
Enhancers that have rs142532517[chr6:13352032]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13348613 13358032 enh8959
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Thymus Heart
Transcript factors that have rs142532517[chr6:13352032]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13352026 13352047 IRF1 JASPAR yes 100019396
chr6 13352030 13352050 RREB1 JASPAR yes 100019397
chr6 13352030 13352051 IRF1 JASPAR yes 100019398
chr6 13352031 13352052 IRF1 JASPAR yes 100019399
chr6 13352032 13352047 FOXP1 JASPAR yes 100019400
Genes associated with rs142532517[chr6:13352032], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More