-
Home
- SNP
- rs142534243[chr1:16173197]
Enhancers that have rs142534243[chr1:16173197]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
16167225 |
16180835 |
enh79 |
|
|
Transcript factors that have rs142534243[chr1:16173197]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
16170561
|
16177274
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107802201
|
|
|
chr1
|
16170561
|
16177274
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107802202
|
|
|
chr1
|
16173185
|
16173201
|
POU4F2
|
JASPAR
|
yes
|
|
27006764
|
|
|
chr1
|
16173185
|
16173201
|
POU4F3
|
JASPAR
|
yes
|
|
27006765
|
|
|
chr1
|
16173187
|
16173202
|
HNF1A
|
JASPAR
|
yes
|
|
27006766
|
|
|
chr1
|
16173188
|
16173200
|
HNF1B
|
JASPAR
|
yes
|
|
27006767
|
|
|
chr1
|
16173188
|
16173201
|
HNF1B
|
JASPAR
|
yes
|
|
27006768
|
|
|
chr1
|
16173189
|
16173203
|
POU4F1
|
JASPAR
|
yes
|
|
27006769
|
|
|
chr1
|
16173189
|
16173205
|
POU4F2
|
JASPAR
|
yes
|
|
27006770
|
|
|
chr1
|
16173189
|
16173205
|
POU4F3
|
JASPAR
|
yes
|
|
27006771
|
|
|
chr1
|
16173193
|
16173204
|
PHOX2A
|
JASPAR
|
yes
|
|
27006772
|
|
|
chr1
|
16173193
|
16173204
|
PROP1
|
JASPAR
|
yes
|
|
27006773
|
|
Genes associated with rs142534243[chr1:16173197], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |