EnhancerDB
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  3. rs142547280[chr18:57620777]
Enhancers that have rs142547280[chr18:57620777]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57615485 57630775 enh4882
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs142547280[chr18:57620777]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57619977 57622784 ZNF274 GTRD no Bone Marrow (K562) 108339086
chr18 57620370 57620890 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825430
chr18 57620397 57620993 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825431
chr18 57620397 57620993 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108339087
chr18 57620402 57620778 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21825432
chr18 57620449 57620905 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21825433
chr18 57620525 57620881 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21825435
chr18 57620567 57621071 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21825436
chr18 57620567 57621071 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108339088
chr18 57620606 57621221 ZNF274 GTRD no Liver (HepG2) 108339089
chr18 57620641 57622675 ZNF274 GTRD no Blood (GM12878) 21825437
chr18 57620641 57622675 ZNF274 GTRD no Blood (GM12878) 108339090
chr18 57620653 57621109 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21825438
chr18 57620653 57621109 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108339091
chr18 57620754 57621274 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21825439
chr18 57620754 57621274 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108339092
chr18 57620771 57620781 SP1 JASPAR yes 111067703
chr18 57620772 57620782 SP1 JASPAR yes 111067704
chr18 57620773 57620778 SP1 TRANSFAC yes 111067705
chr18 57620774 57620779 SP1 TRANSFAC yes 111067706
chr18 57620774 57620780 SP1 TRANSFAC yes 111067707
Genes associated with rs142547280[chr18:57620777], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More