EnhancerDB
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  3. rs142547853[chr1:41960400]
Enhancers that have rs142547853[chr1:41960400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs142547853[chr1:41960400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41960393 41960412 REST JASPAR yes 28395235
chr1 41960397 41960406 TFAP2A JASPAR yes 28395236
Genes associated with rs142547853[chr1:41960400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More